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Nucleus: an open-source library for genomics data and machine learning


Nucleus is a Python library designed to make it easy to read, write, and analyze genomics data in common bioinformatics file formats such as SAM and VCF. In addition, Nucleus enables seamless integration with the TensorFlow machine learning (ML) framework. Nucleus is heavily used in DeepVariant, a state-of-the-art convolutional neural network variant caller, and in other ML projects at Google AI Genomics. This talk will give an overview of Nucleus, its features, and its APIs.


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